Bem-vindo ao CucurbitAgent

Plataforma de nova geração para pesquisa em Cucurbitaceae, unindo grandes modelos de linguagem e dados multi-ômicos.

Cucurbit

Sobre o CucurbitAgent

As cucurbitáceas —melancia, pepino, melão, abóbora, melão-amargo e culturas relacionadas— são culturas importantes em todo o mundo. Conjuntos de dados genômicos e pesquisas publicadas fornecem informações valiosas para compreender a função dos genes e melhorar caracteres das culturas. Esses recursos, porém, estão distribuídos entre bancos de dados e formatos, e os identificadores de genes podem diferir entre versões do genoma. Os pesquisadores frequentemente precisam consultar várias fontes para conectar um gene aos seus padrões de expressão, variantes genéticas, estrutura de proteína prevista e descobertas publicadas.

Desenvolvido pelo Beijing Vegetable Research Center (BVRC) da Beijing Academy of Agriculture and Forestry Sciences (BAAFS), o CucurbitAgent reúne recursos multiômicos de nove espécies cultivadas de cucurbitáceas. A plataforma integra anotações de genes e homólogos candidatos, mapeamentos de IDs de genes entre versões, variantes genéticas naturais, perfis de expressão tecidual e relações de coexpressão, estruturas de proteínas previstas pelo ESMFold, sítios de ligação previstos pelo GPSite e um corpus de literatura curado.

Os usuários podem explorar esses recursos fazendo perguntas em linguagem natural. Um agente de IA conversacional seleciona as ferramentas relevantes, recupera informações dos bancos de dados subjacentes e integra os resultados em respostas vinculadas aos registros de origem. Os pesquisadores também podem pesquisar diretamente nos módulos Gene, Expressão, Proteína e Literatura e baixar os recursos genômicos disponíveis.

Ao conectar essas fontes complementares de evidência, o CucurbitAgent ajuda os pesquisadores a investigar genes candidatos, interpretar padrões de expressão, examinar variantes em seu contexto de sequência e estrutura e desenvolver hipóteses para estudos funcionais e o melhoramento de culturas.

Literatura Recente

(2026-11-02)
Superior Therapeutic Efficacy and Reduced Systemic Toxicity of a Cucurbit[7]uril-Camptothecin Supramolecular Complex in Colorectal Cancer.
Molecular pharmaceutics | 2026 Nov 2

The clinical application of camptothecin (CPT) is limited by poor solubility and severe toxicity. This study compares the therapeutic performance of a cucurbit[7]uril-based CPT complex (CB[7]-CPT) with free CPT and β-cyclodextrin-CPT (β-CD-CPT) in colorectal cancer models. In vitro, free CPT, β-CD-CPT, and CB[7]-CPT were tested on normal LO2 and cancerous HCT116 cells. CB[7] encapsulation reduced toxicity toward normal LO2 cells (IC50: 0.47 μM, ∼25-fold higher than the IC50 of free CPT) while improving potency against HCT116 cells (CB[7]-CPT IC50: 0.24 μM; free CPT IC50: 0.55 μM, ∼2-fold more potent than free CPT). The selectivity index improved from 0.034 (CPT) to 1.976 (CB[7]-CPT), indicating a wide safety margin. Apoptosis assays confirmed that CB[7]-CPT induced significantly greater apoptotic cell death at equivalent concentrations than either free CPT or β-CD-CPT. In HCT116 xenograft models, CB[7]-CPT achieved a tumor inhibition rate of 76%, markedly outperforming free CPT (46%) and β-CD-CPT (62%). This enhanced efficacy was accompanied by increased intratumoral apoptosis, reduced proliferation, and decreased microvessel density. Importantly, CB[7]-CPT markedly attenuated liver, kidney, and gastrointestinal toxicity typically associated with CPT exposure. Pharmacokinetically, CB[7]-CPT displayed a 1.94-fold higher AUC and a 1.59-fold prolonged elimination half-life relative to free CPT, reflecting extended circulation and improved systemic exposure. These findings collectively establish CB[7]-CPT as a highly effective and safer alternative not only to free CPT but also to conventional cyclodextrin-based formulations, demonstrating enhanced selectivity, robust pro-apoptotic activity, and a superior safety profile.

Effects of LD20 exposure to insecticides on the reproductive fitness of Zeugodacus cucurbitae (Diptera: Tephritidae).
Journal of economic entomology | 2026 Nov 2

The melon fly, Zeugodacus cucurbitae (Coquillett), is a major pest of cucurbitaceous fruits, and insecticides are widely used for its management. However, sometimes environmental factors may reduce insecticide deposits below lethal levels, and adult flies may receive only partial exposure during spraying, resulting in exposure to non-lethal doses. This study evaluated the reproductive fitness of Z. cucurbitae survivors following LD20 exposure to commercially available formulations of fipronil, spinosad, and malathion. Adult flies surviving topical LD20 treatment were assigned to 4 treatment combinations: (1) treated female and treated male (F+M+), (2) treated female and untreated male (F+M-), (3) untreated female and treated male (F-M+), and (4) untreated female and untreated male (F-M-). Malathion (0.18 μg/fly) exerted the most pronounced effects on Z. cucurbitae, significantly reducing mating frequency, progeny production, and adult longevity of treated flies, while increasing the proportion of malformed offspring. In contrast, fipronil (0.04 μg/fly) and spinosad (0.005 μg/fly) exhibited significant effects only when both sexes were treated. Notably, LD20 treatment with malathion enhanced the mating competitiveness of treated female flies, indicating a potential stimulatory effect. The findings suggest that LD20 of malathion had a significant impact on the reproductive fitness of melon flies, even when only 1 of the sexes was treated. In contrast, spinosad and fipronil produced adverse effects only when both sexes were treated, with minimal effects observed when only 1 sex was treated.

De novo creation of solid-placenta, few-seeded melon via targeted mutation of CmSLM/CmAGL11
Molecular Horticulture | 2026-11-01

🔗 Recursos externos

Como citar

Se a plataforma foi útil para sua pesquisa, por favor cite:

CucurbitAgent: An AI agent for exploring cucurbit multi-omics resources. Rong Zhang, Jian Zhang, Yuming Zhang, et al. bioRxiv 2026.10.09.758138; doi: https://doi.org/10.64898/2026.10.09.758138