Welkom bij CucurbitAgent
Een intelligent platform van de nieuwe generatie voor Cucurbitaceae-onderzoek, dat grote taalmodellen combineert met multi-omics-gegevens.

Over CucurbitAgent
Cucurbitacen —watermeloen, komkommer, meloen, pompoen, bittermeloen en verwante gewassen— zijn belangrijke gewassen wereldwijd. Genomische datasets en gepubliceerd onderzoek bieden waardevolle informatie voor het begrijpen van genfuncties en het verbeteren van gewaseigenschappen. Deze bronnen zijn echter verspreid over databases en formaten, en genidentificaties kunnen verschillen tussen genoomversies. Onderzoekers moeten vaak meerdere bronnen raadplegen om een gen te verbinden met zijn expressiepatronen, genetische varianten, voorspelde eiwitstructuur en gepubliceerde bevindingen.
Ontwikkeld door het Beijing Vegetable Research Center (BVRC) van de Beijing Academy of Agriculture and Forestry Sciences (BAAFS), brengt CucurbitAgent multi-omics-bronnen van negen geteelde cucurbitsoorten samen. Het platform integreert genannotaties en kandidaat-homologen, gen-ID-koppelingen tussen versies, natuurlijke genetische varianten, weefselexpressieprofielen en co-expressierelaties, door ESMFold voorspelde eiwitstructuren, door GPSite voorspelde bindingsplaatsen en een samengesteld letteratuurcorpus.
Gebruikers kunnen deze bronnen verkennen door vragen in natuurlijke taal te stellen. Een conversationele AI-agent selecteert relevante hulpmiddelen, haalt informatie op uit de onderliggende databases en integreert de resultaten in antwoorden met verwijzingen naar bronrecords. Onderzoekers kunnen ook direct zoeken in de modules Gen, Expressie, Eiwit en Literatuur en beschikbare genoombronnen downloaden.
Door deze complementaire bewijsbronnen te verbinden, helpt CucurbitAgent onderzoekers kandidaat-genen te onderzoeken, expressiepatronen te interpreteren, varianten in hun sequentie- en structuurcontext te bekijken en hypothesen te formuleren voor functionele studies en gewasverbetering.
Nieuwste literatuur
(2026-11-02)The clinical application of camptothecin (CPT) is limited by poor solubility and severe toxicity. This study compares the therapeutic performance of a cucurbit[7]uril-based CPT complex (CB[7]-CPT) with free CPT and β-cyclodextrin-CPT (β-CD-CPT) in colorectal cancer models. In vitro, free CPT, β-CD-CPT, and CB[7]-CPT were tested on normal LO2 and cancerous HCT116 cells. CB[7] encapsulation reduced toxicity toward normal LO2 cells (IC50: 0.47 μM, ∼25-fold higher than the IC50 of free CPT) while improving potency against HCT116 cells (CB[7]-CPT IC50: 0.24 μM; free CPT IC50: 0.55 μM, ∼2-fold more potent than free CPT). The selectivity index improved from 0.034 (CPT) to 1.976 (CB[7]-CPT), indicating a wide safety margin. Apoptosis assays confirmed that CB[7]-CPT induced significantly greater apoptotic cell death at equivalent concentrations than either free CPT or β-CD-CPT. In HCT116 xenograft models, CB[7]-CPT achieved a tumor inhibition rate of 76%, markedly outperforming free CPT (46%) and β-CD-CPT (62%). This enhanced efficacy was accompanied by increased intratumoral apoptosis, reduced proliferation, and decreased microvessel density. Importantly, CB[7]-CPT markedly attenuated liver, kidney, and gastrointestinal toxicity typically associated with CPT exposure. Pharmacokinetically, CB[7]-CPT displayed a 1.94-fold higher AUC and a 1.59-fold prolonged elimination half-life relative to free CPT, reflecting extended circulation and improved systemic exposure. These findings collectively establish CB[7]-CPT as a highly effective and safer alternative not only to free CPT but also to conventional cyclodextrin-based formulations, demonstrating enhanced selectivity, robust pro-apoptotic activity, and a superior safety profile.
The melon fly, Zeugodacus cucurbitae (Coquillett), is a major pest of cucurbitaceous fruits, and insecticides are widely used for its management. However, sometimes environmental factors may reduce insecticide deposits below lethal levels, and adult flies may receive only partial exposure during spraying, resulting in exposure to non-lethal doses. This study evaluated the reproductive fitness of Z. cucurbitae survivors following LD20 exposure to commercially available formulations of fipronil, spinosad, and malathion. Adult flies surviving topical LD20 treatment were assigned to 4 treatment combinations: (1) treated female and treated male (F+M+), (2) treated female and untreated male (F+M-), (3) untreated female and treated male (F-M+), and (4) untreated female and untreated male (F-M-). Malathion (0.18 μg/fly) exerted the most pronounced effects on Z. cucurbitae, significantly reducing mating frequency, progeny production, and adult longevity of treated flies, while increasing the proportion of malformed offspring. In contrast, fipronil (0.04 μg/fly) and spinosad (0.005 μg/fly) exhibited significant effects only when both sexes were treated. Notably, LD20 treatment with malathion enhanced the mating competitiveness of treated female flies, indicating a potential stimulatory effect. The findings suggest that LD20 of malathion had a significant impact on the reproductive fitness of melon flies, even when only 1 of the sexes was treated. In contrast, spinosad and fipronil produced adverse effects only when both sexes were treated, with minimal effects observed when only 1 sex was treated.
🔗 Externe bronnen
Citeer ons
Als u dit platform nuttig vindt voor uw onderzoek, citeer dan:
CucurbitAgent: An AI agent for exploring cucurbit multi-omics resources. Rong Zhang, Jian Zhang, Yuming Zhang, et al. bioRxiv 2026.10.09.758138; doi: https://doi.org/10.64898/2026.10.09.758138